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Bioinformatics operations, data types, formats, identifiers and topics
EDAM
All terms in EDAM
Label
Id
Description
Biodiversity data format
format_3706
[Data format for biodiversity data.]
Format (by type of data)
format_2350
[A placeholder concept for visual navigation by dividing data formats by the content of the data that is represented.]
Biodiversity data
data_3707
[Machine-readable biodiversity data.]
Protein accession
data_2907
[Accession of a protein deposited in a database.]
Molecule accession
data_2901
[Accession of a specific molecule (catalogued in a database).]
Protein identifier
data_0989
[Identifier of a protein.]
Tabix index file format
format_3700
[Index file format used by the samtools package to index TAB-delimited genome position files.]
Binary format
format_2333
[Binary format.]
Data index format
format_3326
[Format of a data index of some type.]
Data index
data_0955
[An index of data of biological relevance.]
Organism accession
data_2908
[An accession of annotation on a (group of) organisms (catalogued in a database).]
Organism identifier
data_1869
[A unique identifier of a (group of) organisms.]
Organism name
data_2909
[The name of an organism (or group of organisms).]
Name
data_2099
[A name of a thing, which need not necessarily uniquely identify it.]
MSF
format_3702
[Proprietary mass-spectrometry format of Thermo Scientific's ProteomeDiscoverer software.]
Mass spectrometry data format
format_3245
[Format for mass pectra and derived data, include peptide sequences etc.]
Sequin format
format_3701
[A five-column, tab-delimited table of feature locations and qualifiers for importing annotation into an existing Sequin submission (an NCBI tool for submitting and updating GenBank entries).]
Sequence feature table format (text)
format_2206
[Text format for a sequence feature table.]
Genome accession
data_2903
[An accession of a particular genome (in a database).]
Genome identifier
data_2749
[An identifier of a particular genome.]