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RPKM

^ http://edamontology.org/format_3980

Tab-delimited format for gene expression levels table, calculated as Reads Per Kilobase per Million (RPKM) mapped reads.

Synonyms: Gene expression levels table format

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formats, edam

Created in

1.25

comment

For example a 1kb transcript with 1000 alignments in a sample of 10 million reads (out of which 8 million reads can be mapped) will have RPKM = 1000/(1 * 8) = 125

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