Principal component visualisation

http://edamontology.org/operation_2939

Visualize the results of a principal component analysis (orthogonal data transformation). For example, visualization of the principal components (essential subspace) coming from a Principal Component Analysis (PCA) on the trajectory atomistic coordinates of a molecular structure.

Synonyms: Principal component plotting, Microarray principal component rendering, Essential Dynamics visualization, Principal modes visualization, PCA plotting, PCA visualization, ED visualization, Microarray principal component plotting

Tree view
Term history

Term info

Subsets

operations, edam

Created in

beta12orEarlier

comment

The use of Principal Component Analysis (PCA), a multivariate statistical analysis to obtain collective variables on the atomic positional fluctuations, helps to separate the configurational space in two subspaces: an essential subspace containing relevant motions, and another one containing irrelevant local fluctuations.

Term relations

Subclass of:

Visualisation