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All terms in EDAM

Label Id Description
Structure alignment processing operation_2952 [Process (read and / or write) a molecular tertiary (3D) structure alignment.]
Alignment processing operation_2951 [Process (read and / or write) an alignment of two or more molecular sequences, structures or derived data.]
Directory metadata data_0583 [A directory on disk from which files are read.]
Database data_0581 [A digital data archive typically based around a relational model but sometimes using an object-oriented, tree or graph-based model.]
Residue distance calculation operation_2950 [Calculate contacts between residues, or between residues and other groups, in a protein structure, on the basis of distance calculations.]
SPSS format_3555 [File format used for scripts for the Statistical Package for the Social Sciences.]
R file format format_3554 [File format used for scripts written in the R programming language for execution within the R software environment, typically for statistical computation and graphics.]
nrrd format_3551 [Nearly Raw Rasta Data format designed to support scientific visualisation and image processing involving N-dimensional raster data.]
mhd format_3550 [Text-based tagged file format for medical images generated using the MetaImage software package.]
PCR primer design operation_0308 [Design or predict oligonucleotide primers for PCR and DNA amplification etc.]
Microarray probe design operation_0309 [Predict and/or optimize oligonucleotide probes for DNA microarrays, for example for transcription profiling of genes, or for genomes and gene families.]
MHTML format_3556 [MIME HTML format for Web pages, which can include external resources, including images, Flash animations and so on.]
Protein threading operation_0302 [Align molecular sequence to structure in 3D space (threading).]
Fold recognition operation_0303 [Recognize (predict and identify) known protein structural domains or folds in protein sequence(s) which (typically) are not accompanied by any significant sequence similarity to know structures.]
Codon usage fraction calculation operation_2964 [Calculate the differences in codon usage fractions between two sequences, sets of sequences, codon usage tables etc.]
Codon usage bias plotting operation_2963 [Generate a codon usage bias plot.]
Sequence profile alignment operation_0300 [Align molecular sequence(s) to sequence profile(s), or profiles to other profiles. A profile typically represents a sequence alignment.]
Sequence-to-3D-profile alignment operation_0301 [Align molecular sequence(s) to structural (3D) profile(s) or template(s) (representing a structure or structure alignment).]
Codon usage bias calculation operation_2962 [Calculate codon usage bias, e.g. generate a codon usage bias plot.]
Natural language processing topic_0218 [The processing and analysis of natural language, such as scientific literature in English, in order to extract data and information, or to enable human-computer interaction.]