JSON

All terms in EDAM

Label Id Description
Sequence retrieval (by keyword) operation_0345 [Query a database and retrieve sequences containing a given keyword.]
Nucleotide code data_1007 [String of one or more ASCII characters representing a nucleotide.]
Ontology identifier data_2338 [Any arbitrary identifier of an ontology.]
Ontology concept name data_2339 [The name of a concept in an ontology.]
Sequence database search (by amino acid composition) operation_0348 [Search a sequence database and retrieve sequences of a given amino acid composition.]
Sequence database search (by property) operation_0349 [Search a sequence database and retrieve sequences with a specified property, typically a physicochemical or compositional property.]
CAS number data_1002 [CAS registry number of a chemical compound; a unique numerical identifier of chemicals in the scientific literature, as assigned by the Chemical Abstracts Service.]
Chemical name (synonymous) data_1001 [Synonymous name of a chemical compound.]
Bit score data_2335 [A score derived from the alignment of two sequences, which is then normalised with respect to the scoring system.]
Chemical name (brand) data_1000 [Brand name of a chemical compound.]
Translation phase specification data_2336 [Phase for translation of DNA (0, 1 or 2) relative to a fragment of the coding sequence.]
Disease name data_3668 [The name of some disease.]
Sequence profile database search operation_0342 [Search a database of sequence profiles with a query sequence.]
Transmembrane protein database search operation_0343 [Search a database of transmembrane proteins, for example for sequence or structural similarities.]
HET group name data_1005 [3-letter code word for a ligand (HET group) from a PDB file, for example ATP.]
Protein secondary database search operation_0340 [Search a secondary protein database (of classification information) to assign a protein sequence(s) to a known protein family or group.]
Chemical registry number (Gmelin) data_1004 [Gmelin registry number of a chemical compound.]
Motif database search operation_0341 [Screen a sequence against a motif or pattern database.]
Chemical registry number (Beilstein) data_1003 [Beilstein registry number of a chemical compound.]
Invertebrates topic_2819 [Invertebrates, e.g. information on a specific invertebrate genome including molecular sequences, genes and annotation.]