JSON

All terms in EDAM

Label Id Description
Residue cluster calculation operation_0393 [Calculate clusters of contacting residues in protein structures.]
Pathway ID (ConsensusPathDB) data_2345 [Identifier of a pathway from the ConsensusPathDB pathway database.]
Restriction enzyme name data_1013 [Name of a restriction enzyme.]
Enzyme name data_1012 [Name of an enzyme.]
Hydrogen bond calculation operation_0394 [Identify potential hydrogen bonds between amino acids and other groups.]
EC number data_1011 [An Enzyme Commission (EC) number of an enzyme.]
Protein distance matrix calculation operation_0391 [Calculate a matrix of distance between residues (for example the C-alpha atoms) in a protein structure.]
Sequence cluster ID (UniRef100) data_2347 [Unique identifier of an entry from the UniRef100 database.]
Polymorphism report format format_2051 [Format for sequence polymorphism data.]
Sequence cluster ID (UniRef90) data_2348 [Unique identifier of an entry from the UniRef90 database.]
Contact map calculation operation_0392 [Calculate a residue contact map (typically all-versus-all inter-residue contacts) for a protein structure.]
Ramachandran plot validation operation_0397 [Validate a Ramachandran plot of a protein structure.]
Pathway or network name data_2342 [The name of a biological pathway or network.]
Pathway or network identifier data_1082 [Identifier of an entry from a database of biological pathways or networks.]
Residue non-canonical interaction detection operation_0395 [Calculate non-canonical atomic interactions in protein structures.]
Pathway ID (KEGG) data_2343 [Identifier of a pathway from the KEGG pathway database.]
Pathway ID (NCI-Nature) data_2344 [Identifier of a pathway from the NCI-Nature pathway database.]
Ramachandran plot calculation operation_0396 [Calculate a Ramachandran plot of a protein structure.]
Sequence position specification data_1014 [A specification (partial or complete) of one or more positions or regions of a molecular sequence or map.]
Domain-domain interaction (indirect) data_2360 [Data on indirect protein domain-protein domain interaction(s).]