JSON

All terms in EDAM

Label Id Description
AraC-XylS ID data_2742 [Identifier of a transcription factor from the AraC-XylS database.]
Gene name (HUGO) data_2743 [Name of an entry (gene) from the HUGO database.]
Locus ID (PseudoCAP) data_2744 [Identifier of a locus from the PseudoCAP database.]
Sequence similarity data_1413 [Sequence similarity is the similarity (expressed as a percentage) of two molecular sequences calculated from their alignment, a scoring matrix for scoring characters substitutions and penalties for gap insertion and extension.]
Sequence similarity score data_0865 [A value representing molecular sequence similarity.]
Sequence identity data_1412 [Sequence identity is the number (%) of matches (identical characters) in positions from an alignment of two molecular sequences.]
Terminal gap extension penalty data_1411 [A number defining the penalty for extending gaps at the termini of an alignment, either from the N/C terminal of protein or 5'/3' terminal of nucleotide sequences.]
Gap extension penalty data_1398 [A penalty for extending a gap in an alignment.]
Gene name (Genolist) data_2740 [Name of an entry (gene) from the Genolist genes database.]
Terminal gap opening penalty data_1410 [A number defining the penalty for opening gaps at the termini of an alignment, either from the N/C terminal of protein or 5'/3' terminal of nucleotide sequences.]
Gap opening penalty data_1397 [A penalty for opening a gap in an alignment.]
MEME Dirichlet prior format_1350 [Dirichlet distribution MEME format.]
Dirichlet distribution format format_2074 [Data format of a dirichlet distribution.]
HMMER emission and transition format_1351 [Format of a report from the HMMER package on the emission and transition counts of a hidden Markov model.]
HMM emission and transition counts format format_2075 [Data format for the emission and transition counts of a hidden Markov model.]
Protein sequence comparison operation_2509 [Compare two or more protein sequences.]
Nucleic acid sequence comparison operation_2508 [Compare two or more nucleic acid sequences.]
prosite-pattern format_1356 [Format of a regular expression pattern from the Prosite database.]
EMBOSS sequence pattern format_1357 [Format of an EMBOSS sequence pattern.]
Sequence data processing operation_2503 [Process (read and / or write) molecular sequence data.]