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All terms in EDAM

Label Id Description
Coding RNA topic_0655 [Protein-coding regions including coding sequences (CDS), exons, translation initiation sites and open reading frames]
Functional, regulatory and non-coding RNA topic_0659 [Non-coding or functional RNA sequences, including regulatory RNA sequences, ribosomal RNA (rRNA) and transfer RNA (tRNA).]
Gene regulatory network prediction operation_2437 [Predict a network of gene regulation.]
Prediction and recognition operation_2423 [Predict, recognise, detect or identify some properties of a biomolecule.]
Network analysis operation_3927 [Generate, process or analyse a biological network.]
Protein identification operation_3767 [Identification of protein, for example from one or more peptide identifications by tandem mass spectrometry.]
Gene-set enrichment analysis operation_2436 [Identify classes of genes or proteins that are over or under-represented in a large set of genes or proteins. For example analysis of a set of genes corresponding to a gene expression profile, annotated with Gene Ontology (GO) concepts, where eventual over-/under-representation of certain GO concept within the studied set of genes is revealed.]
Enrichment analysis operation_3501 [Analysis of a set of objects, such as genes, annotated with given categories, where eventual over-/under-representation of certain categories within the studied set of objects is revealed.]
GO-term enrichment data data_3754 [A ranked list of Gene Ontology concepts, each associated with a p-value, concerning or derived from the analysis of e.g. a set of genes or proteins.]
Gene expression profile processing operation_2435 [Process (read and / or write) a gene expression profile.]
Weighted correlation network analysis operation_3766 [A data mining method typically used for studying biological networks based on pairwise correlations between variables.]
Data retrieval (codon usage table) operation_2434 [Retrieve a codon usage table and / or associated annotation.]
RNA secondary structure analysis operation_2439 [Process (read and / or write) RNA secondary structure data.]
rRNA topic_0660 [One or more ribosomal RNA (rRNA) sequences.]
Pathway or network processing operation_2438 [Generate, analyse or handle a biological pathway or network.]
Service management operation_3760 [Operations concerning the handling and use of other tools.]
Aligned sequence order data_1396 [Controls the order of sequences in an output sequence alignment.]
Score end gaps control data_1395 [Whether end gaps are scored or not.]
Codon usage table processing operation_2433 [Process (read and / or write) a codon usage table.]
Microarray data processing operation_2432 [Process (read and / or write) microarray data.]