JSON

All terms in EDAM

Label Id Description
Protein atom surface calculation (accessible) operation_1817 [Calculate the solvent accessibility ('accessible surface') for each atom in a structure.]
REBASE proto enzyme report format format_1515 [Format of an entry from the proto section of the REBASE enzyme database.]
Protein atom surface calculation (accessible molecular) operation_1818 [Calculate the solvent accessibility ('accessible molecular surface') for each atom in a structure.]
REBASE withrefm enzyme report format format_1516 [Format of an entry from the withrefm section of the REBASE enzyme database.]
Statistics and probability topic_2269 [The application of statistical methods to biological problems.]
Mathematics topic_3315 [The study of numbers (quantity) and other topics including structure, space, and change.]
Surface rendering operation_1816 [Calculate the positions of dots that are homogeneously distributed over the surface of a molecule.]
Molecular surface analysis operation_3351 [Analyse the surface properties of proteins or other macromolecules, including surface accessible pockets, interior inaccessible cavities etc.]
IntEnz enzyme report format format_1511 [Format of an entry from IntEnz (The Integrated Relational Enzyme Database).]
BRENDA enzyme report format format_1512 [Format of an entry from the BRENDA enzyme database.]
Protein residue surface calculation (accessible) operation_1819 [Calculate the solvent accessibility ('accessible surface') for each residue in a structure.]
KEGG REACTION enzyme report format format_1513 [Format of an entry from the KEGG REACTION database of biochemical reactions.]
Molecular modelling topic_2275 [The construction, analysis, evaluation, refinement etc. of models of a molecules properties or behaviour, including the modelling the structure of proteins in complex with small molecules or other macromolecules (docking).]
Transmembrane protein prediction topic_2278 [Predict transmembrane domains and topology in protein sequences.]
Sequence retrieval operation_1813 [Query a sequence data resource (typically a database) and retrieve sequences and / or annotation.]
Structure retrieval operation_1814 [Query a tertiary structure data resource (typically a database) and retrieve structures, structure-related data and annotation.]
Protein function prediction topic_2276 [The prediction of functional properties of a protein.]
SNP topic_2277 [Single nucleotide polymorphisms (SNP) and associated data, for example, the discovery and annotation of SNPs.]
Parsing operation_1812 [Parse, prepare or load a user-specified data file so that it is available for use.]
Structure database search topic_2271 [Search for and retrieve molecular structures that are similar to a structure-based query (typically another structure or part of a structure).]