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All terms in EDAM

Label Id Description
EMBOSS report data_2143 [An application report generated by the EMBOSS suite.]
Gene set testing operation_3224 [Analyse gene expression patterns (typically from DNA microarray datasets) to identify sets of genes that are associated with a specific trait, condition, clinical outcome etc.]
Differential gene expression profiling operation_3223 [Identify from molecular sequence analysis (typically from analysis of microarray or RNA-seq data) genes whose expression levels are significantly different between two sample groups.]
Gene expression profiling operation_0314 [The measurement of the activity (expression) of multiple genes in a cell, tissue, sample etc., in order to get an impression of biological function.]
Sequence offset data_2145 [An offset for a single-point sequence position.]
Threshold data_2146 [A value that serves as a threshold for a tool (usually to control scoring or output).]
Peak calling operation_3222 [Identify putative protein-binding regions in a genome sequence from analysis of Chip-sequencing data or ChIP-on-chip data.]
Nucleic acid feature detection operation_0415 [Predict, recognise and identify features in nucleotide sequences such as functional sites or regions, typically by scanning for known motifs, patterns and regular expressions.]
Nucleic acid signature data_3492 [An informative report about a specific or conserved nucleic acid sequence pattern.]
Sequence signature report data_2762 [An informative report about a specific or conserved pattern in a molecular sequence, such as its context in genes or proteins, its role, origin or method of construction, etc.]
Sequence similarity plot data_2161 [A plot of sequence similarities identified from word-matching or character comparison.]
Sequence alignment report data_0867 [An informative report of molecular sequence alignment-derived data or metadata.]
Helical wheel data_2162 [An image of peptide sequence sequence looking down the axis of the helix for highlighting amphipathicity and other properties.]
phylip property values format_2243 [PHYLIP file format for phylogenetic property data.]
DNA sequence data_3494 [A DNA sequence.]
Helical net data_2163 [An image of peptide sequence sequence in a simple 3,4,3,4 repeating pattern that emulates at a simple level the arrangement of residues around an alpha helix.]
RNA sequence data_3495 [An RNA sequence.]
Protein sequence properties plot data_2164 [A plot of general physicochemical properties of a protein sequence.]
Chemical structure sketch data_3490 [A sketch of a small molecule made with some specialised drawing package.]
Fickett testcode plot data_2160 [A plot of Fickett testcode statistic (identifying protein coding regions) in a nucleotide sequences.]